Day 4 Pipelining | Thursday October 24, 2019

Over the last three days, you’ve learned a lot about different pipelines and tools that you can use in GATK. Today we will be learning all about how those pipelines are written in a language called WDL. In the afternoon we cover other useful topics to working on the cloud, including Docker and BigQuery.

Morning (10:00 - 1:00 pm)

  • WDL and Cromwell basics
  • Hello World WDL Tutorial (hands-on)
  • Coffee Break
  • WDL puzzles (hands-on)

Lunch Break (1:00 - 2:00 pm)

Afternoon (2:00 - 5:00 pm)

  • Docker
  • Coffee Break
  • BigQuery

Networking dinner (8:00pm). Only for those that have registered for such event