==== Day 3 (September, 19th): Somatic variant discovery ====

=== Morning (10:45 – 13:45) ===
    10:45 Recap of somatic variant discovery Best Practices
    11:00 Somatic SNVs and indels with Mutect2
    11:45 Coffee/tea break
    12:15 Hands-on Mutect2
=== Lunch Time (14:00 – 15:00) ===

=== Afternoon (15:15 – 18:15) ===
    15:15 Somatic CNVs with GATK CNV
    15:45 Hands-on GATK CNV
    17:00 Coffee/tea break
    17:30 Preview of upcoming methods: germline CNV and SV
    18:00 Open question time