==== Day 2 (September, 18th): Germline short variant discovery ====

=== Morning (10:45 – 14:00) ===
    10:45 Recap of germline variant discovery Best Practices
    11:00 HaplotypeCaller
    11:30 Joint-calling with GenomicsDB + GenotypeGVCFs
    12:00 Coffee/tea break
    12:30 Hands-on joint-calling

=== Lunch Time (14:00 – 15:00) ===

=== Afternoon (15:15 – 18:15) ===
    15:15 Filtering with VQSR
    15:45 Genotype Refinement
    16:15 Callset Evaluation
    16:30 Coffee/tea break
    17:00 Hands-on filtering approaches